mode : "targeted"

max_fastq_records: 0

genome: "GRCh38_hmf"
ref_data_hmf_data_path: "/projects/ref_files/hmf_data_5.34_38--2/"
ref_data_virusbreakenddb_path: "/projects/ref_files/virusbreakenddb_20210401/"
ref_data_hla_slice_bed: "/projects/ref_files/hla_slice/grch38_alt.plus_homologous.bed"