FastQCFastQC Report
Fri 13 Dec 2024
dataset02_trim.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenamedataset02_trim.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20842559
Sequences flagged as poor quality0
Sequence length50-75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAAAAA929190.4458137793924441No Hit
CGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCAAA249590.11975017079236769No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)