task_id hash native_id name status exit submit duration realtime %cpu peak_rss peak_vmem rchar wchar 4 23/2a7667 21000606 NFCORE_SAREK:PREPARE_INTERVALS:CREATE_INTERVALS_BED (final_padded_hg38_wes_targets_chr_sorted.bed) COMPLETED 0 2026-02-23 10:27:33.109 10.4s 1s 95.0% 6.5 MB 18.6 MB 45.7 MB 45.6 MB 2 fc/9af0d5 21000607 NFCORE_SAREK:PREPARE_GENOME:UNZIP_LOCI (G1000_loci_hg38.zip) COMPLETED 0 2026-02-23 10:27:33.454 15s 3s 92.8% 9.9 MB 19.9 MB 82.9 MB 394.4 MB 1 5d/e3305a 21000610 NFCORE_SAREK:PREPARE_GENOME:UNZIP_ALLELES (G1000_alleles_hg38.zip) COMPLETED 0 2026-02-23 10:27:34.888 13.7s 3s 92.4% 10.2 MB 19.9 MB 101.3 MB 356.8 MB 7 96/477afb 21000611 NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_COMBINED (final_padded_hg38_wes_targets_chr_sorted) COMPLETED 0 2026-02-23 10:27:34.922 13.7s 1.4s 69.4% 13.2 MB 218.6 MB 52.5 MB 7.1 MB 8 07/673e94 21000608 NFCORE_SAREK:PREPARE_GENOME:UNZIP_RT (RT_G1000_hg38.zip) COMPLETED 0 2026-02-23 10:27:33.621 24.9s 14s 96.2% 10.1 MB 20.1 MB 340.5 MB 4.1 GB 27 36/39c06e 21000633 NFCORE_SAREK:PREPARE_INTERVALS:TABIX_BGZIPTABIX_INTERVAL_SPLIT (chr1_68991-70108) COMPLETED 0 2026-02-23 10:27:48.091 25.5s 1.1s 86.9% 13.1 MB 18.3 MB 52.5 MB 7.1 MB 3 71/71003e 21000612 NFCORE_SAREK:PREPARE_GENOME:UNZIP_GC (GC_G1000_hg38.zip) COMPLETED 0 2026-02-23 10:27:34.955 43.6s 32s 93.8% 10.2 MB 20.1 MB 1.1 GB 4.1 GB 23 e3/6d01d1 21000627 NFCORE_SAREK:SAREK:FASTQC (RMHC003_haystack_normal-L001) COMPLETED 0 2026-02-23 10:27:35.740 5m 58s 5m 50s 194.3% 1.6 GB 7.1 GB 4.5 GB 3.8 MB 12 37/f8e07f 21000617 NFCORE_SAREK:SAREK:FASTQC (RMHC001_haystack_normal-L001) COMPLETED 0 2026-02-23 10:27:35.136 5m 58s 5m 51s 198.9% 1.5 GB 7.1 GB 4.8 GB 3.8 MB 20 2c/8b947d 21000625 NFCORE_SAREK:SAREK:FASTQC (RMHC002_haystack_normal-L001) COMPLETED 0 2026-02-23 10:27:35.425 8m 43s 8m 36s 197.2% 1.5 GB 7.1 GB 6.9 GB 3.8 MB 22 10/7667a8 21000626 NFCORE_SAREK:SAREK:FASTQC (RMHC002_haystack_tumour-L001) COMPLETED 0 2026-02-23 10:27:35.448 12m 58s 12m 50s 196.9% 1.5 GB 7.1 GB 9.7 GB 4 MB 13 d1/4df09e 21000622 NFCORE_SAREK:SAREK:FASTQC (RMHC001_haystack_tumour-L002) COMPLETED 0 2026-02-23 10:27:35.333 13m 53s 13m 43s 198.8% 1.5 GB 7.1 GB 11 GB 4 MB 17 43/d93546 21000620 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:FASTQTOBAM (RMHC003_haystack_normal-L001) COMPLETED 0 2026-02-23 10:27:35.265 14m 48s 14m 41s 124.0% 400.5 MB 9.9 GB 4.5 GB 4.4 GB 9 56/6b4537 21000613 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:FASTQTOBAM (RMHC001_haystack_normal-L001) COMPLETED 0 2026-02-23 10:27:34.978 16m 19s 16m 6s 125.1% 401.9 MB 9.9 GB 4.8 GB 4.6 GB 25 3d/4877c5 21000630 NFCORE_SAREK:SAREK:FASTQC (RMHC003_haystack_tumour-L001) COMPLETED 0 2026-02-23 10:27:35.826 16m 28s 16m 17s 196.4% 1.6 GB 7.1 GB 14.4 GB 4 MB 21 37/9e681b 21000624 NFCORE_SAREK:SAREK:FASTQC (RMHC002_haystack_tumour-L002) COMPLETED 0 2026-02-23 10:27:35.396 17m 23s 17m 12s 194.0% 1.7 GB 7.1 GB 14.6 GB 4 MB 14 84/2df31c 21000616 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:FASTQTOBAM (RMHC002_haystack_normal-L001) COMPLETED 0 2026-02-23 10:27:35.111 23m 9s 22m 57s 123.5% 414.7 MB 9.9 GB 6.9 GB 6.8 GB 24 37/7c770a 21000628 NFCORE_SAREK:SAREK:FASTQC (RMHC003_haystack_tumour-L002) COMPLETED 0 2026-02-23 10:27:35.777 25m 18s 25m 9s 195.9% 1.6 GB 7.1 GB 21.6 GB 4 MB 19 39/88c047 21000623 NFCORE_SAREK:SAREK:FASTQC (RMHC001_haystack_tumour-L001) COMPLETED 0 2026-02-23 10:27:35.356 25m 38s 25m 28s 197.5% 1.5 GB 7.1 GB 19.4 GB 4 MB 5 83/01071f 21000609 NFCORE_SAREK:DOWNLOAD_CACHE_SNPEFF_VEP:ENSEMBLVEP_DOWNLOAD (115_GRCh38) COMPLETED 0 2026-02-23 10:27:34.222 27m 39s 27m 29s 18.2% 46.2 MB 59.8 MB 94.2 GB 70.6 GB 10 24/f83975 21000614 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:FASTQTOBAM (RMHC001_haystack_tumour-L002) COMPLETED 0 2026-02-23 10:27:35.048 37m 49s 37m 40s 124.1% 271.6 MB 9.9 GB 11.1 GB 10.7 GB 16 b0/f05bbd 21000619 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:FASTQTOBAM (RMHC002_haystack_tumour-L001) COMPLETED 0 2026-02-23 10:27:35.232 37m 54s 37m 44s 123.7% 262.1 MB 9.9 GB 9.7 GB 9.4 GB 26 69/0652f6 21000629 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:FASTQTOBAM (RMHC003_haystack_tumour-L001) COMPLETED 0 2026-02-23 10:27:35.804 46m 38s 46m 30s 123.8% 452.9 MB 9.9 GB 14.4 GB 13.9 GB 15 65/244165 21000618 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:FASTQTOBAM (RMHC002_haystack_tumour-L002) COMPLETED 0 2026-02-23 10:27:35.181 49m 54s 49m 46s 121.8% 396 MB 9.9 GB 14.6 GB 14.2 GB 28 fb/d64fb7 21000673 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:BAM2FASTQ (RMHC003_haystack_normal-L001) COMPLETED 0 2026-02-23 10:42:23.833 48m 5s 47m 43s 102.3% 9.7 MB 232.3 MB 30.1 GB 29.9 GB 11 27/e5b622 21000615 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:FASTQTOBAM (RMHC001_haystack_tumour-L001) COMPLETED 0 2026-02-23 10:27:35.087 1h 3m 49s 1h 3m 37s 125.0% 397.1 MB 9.9 GB 19.4 GB 18.7 GB 29 9a/da22d0 21000674 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:BAM2FASTQ (RMHC001_haystack_normal-L001) COMPLETED 0 2026-02-23 10:43:53.756 51m 25s 51m 5s 102.3% 9.7 MB 232.3 MB 31.8 GB 31.6 GB 18 0c/7c0130 21000621 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:FASTQTOBAM (RMHC003_haystack_tumour-L002) COMPLETED 0 2026-02-23 10:27:35.301 1h 13m 39s 1h 13m 29s 123.4% 273.6 MB 9.9 GB 21.6 GB 21.1 GB 38 78/e136b0 21000759 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:ALIGN_UMI:BWAMEM1_MEM (RMHC003_haystack_normal-L001) COMPLETED 0 2026-02-23 11:30:30.131 13m 19s 13m 5s 1939.5% 6.8 GB 9.6 GB 45.4 GB 42.3 GB 43 4d/e9f7b1 21000761 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:ALIGN_UMI:BWAMEM1_MEM (RMHC001_haystack_normal-L001) COMPLETED 0 2026-02-23 11:35:19.657 13m 12m 29s 2052.9% 6.7 GB 9.6 GB 47.4 GB 44.4 GB 45 a9/742ac4 21000802 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:GROUPREADSBYUMI (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 11:43:50.233 20m 44s 20m 22s 102.9% 3.2 GB 9.9 GB 13.6 GB 10.7 GB 30 6b/d70da9 21000705 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:BAM2FASTQ (RMHC002_haystack_normal-L001) COMPLETED 0 2026-02-23 10:50:43.903 1h 17m 1h 16m 32s 102.2% 9.7 MB 232.3 MB 46 GB 45.9 GB 46 14/4286f3 21000938 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:GROUPREADSBYUMI (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 11:48:19.448 24m 30s 22m 34s 103.0% 3 GB 9.9 GB 14.5 GB 11.5 GB 47 f7/37517b 21002162 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:CALLUMICONSENSUS (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:04:34.555 12m 15s 12m 4s 334.0% 7.2 GB 38.5 GB 9.2 GB 10.3 GB 55 57/e46564 21002531 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_MAP_MAP (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:16:50.280 54.6s 29s 138.2% 7.1 MB 235.7 MB 4.6 GB 5.2 KB 56 d7/2e7a59 21002532 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_UNMAP_MAP (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:16:50.485 54.4s 30s 139.1% 7.1 MB 235.7 MB 4.6 GB 5.2 KB 53 5a/ac6641 21002533 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_MAP_UNMAP (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:16:50.735 54.2s 29s 138.5% 7.1 MB 235.7 MB 4.6 GB 5.2 KB 57 5b/348aab 21002542 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:COLLATE_FASTQ_MAP (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:17:45.365 29.5s 1s 18.9% 6.6 MB 233.4 MB 181 KB 29.5 KB 51 6e/402325 21002272 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:ALIGN_UMI:BWAMEM1_MEM (RMHC002_haystack_normal-L001) COMPLETED 0 2026-02-23 12:07:44.989 17m 25s 16m 54s 2110.3% 6.8 GB 9.6 GB 66.3 GB 64.2 GB 54 89/73d0fb 21002530 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_UNMAP_UNMAP (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:16:50.073 8m 35s 8m 13s 85.6% 11.3 MB 236.4 MB 4.6 GB 3 GB 52 07/f64c94 21002489 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:CALLUMICONSENSUS (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:12:49.586 13m 15s 12m 53s 318.8% 8.7 GB 38.5 GB 9.8 GB 10.9 GB 62 88/48e20c 21002551 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_UNMAP_MAP (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:26:05.647 39.4s 34s 139.8% 7.2 MB 235.7 MB 4.9 GB 5.2 KB 60 99/ab60d8 21002552 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_MAP_UNMAP (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:26:06.367 38.6s 34s 138.9% 7.1 MB 235.7 MB 4.9 GB 5.2 KB 61 b0/a75f5b 21002550 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_MAP_MAP (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:26:05.117 39.9s 31s 140.9% 7 MB 235.7 MB 4.9 GB 5.2 KB 64 c6/c04785 21002555 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:COLLATE_FASTQ_MAP (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:26:46.331 28.6s 1s 19.1% 6.5 MB 233.4 MB 181 KB 29.5 KB 59 a5/8a57a1 21002549 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_MERGE_UNMAP (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:25:25.116 8m 5s 7m 48s 90.0% 11.9 MB 228.3 MB 3 GB 3 GB 63 bb/910767 21002553 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_UNMAP_UNMAP (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:26:07.081 9m 8s 9m 3s 86.5% 12.2 MB 236.4 MB 4.9 GB 3.2 GB 65 0f/e3c909 21002558 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:COLLATE_FASTQ_UNMAP (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:33:30.317 7m 10s 6m 35s 171.2% 1.1 GB 2.6 GB 12.3 GB 13.1 GB 67 e2/a402b2 21002561 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:CAT_FASTQ (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:40:40.240 34.8s 1.9s 88.8% 12.9 MB 15.7 MB 3.8 GB 3.8 GB 68 a6/956d3b 21002562 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTP (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:41:15.237 1m 40s 1m 14s 824.6% 1.3 GB 2.3 GB 3.9 GB 3.4 GB 66 23/5eaa6c 21002559 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_MERGE_UNMAP (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:35:15.114 8m 50s 8m 15s 91.9% 11.9 MB 228.3 MB 3.2 GB 3.3 GB 78 8f/a5f963 21002565 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:57.134 1m 8s 37.8s 1677.6% 7.9 GB 26.3 GB 7.5 GB 2.2 GB 101 ef/22678c 21002569 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:58.512 1m 7s 38s 1699.9% 7.9 GB 26.4 GB 7.5 GB 2.2 GB 112 7c/e0269e 21002572 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:58.781 1m 6s 37.1s 1692.6% 7.8 GB 26.3 GB 7.5 GB 2.2 GB 74 af/4a4060 21002564 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:56.788 1m 8s 37.3s 1685.8% 8 GB 26.3 GB 7.5 GB 2.2 GB 115 89/9dc122 21002574 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:59.024 1m 6s 37.4s 1683.1% 7.9 GB 26.3 GB 7.5 GB 2.2 GB 97 d8/012973 21002568 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:58.047 1m 7s 37.1s 1710.0% 8 GB 26.5 GB 7.5 GB 2.2 GB 108 ad/7b1468 21002570 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:58.555 1m 7s 36.9s 1689.4% 8 GB 26.3 GB 7.5 GB 2.2 GB 77 2c/777ee8 21002563 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:56.595 1m 13s 39.1s 1645.2% 7.8 GB 26.3 GB 7.5 GB 2.2 GB 89 49/94f91a 21002567 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:58.003 1m 12s 40s 1632.1% 7.8 GB 26.4 GB 7.5 GB 2.2 GB 85 7b/b5cd05 21002566 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:57.292 1m 13s 43.3s 1588.8% 7.9 GB 27.1 GB 7.5 GB 2.2 GB 114 71/10bb20 21002573 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:58.974 1m 16s 43.6s 1643.1% 7.7 GB 26.1 GB 7.5 GB 2.2 GB 109 cd/98044a 21002571 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 12:42:58.734 1m 16s 43.6s 1610.9% 7.9 GB 26.7 GB 7.5 GB 2.2 GB 32 6d/b9b867 21000735 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:BAM2FASTQ (RMHC002_haystack_tumour-L001) COMPLETED 0 2026-02-23 11:05:29.081 1h 39m 26s 1h 39m 13s 102.5% 9.4 MB 232.3 MB 66.4 GB 66 GB 117 70/8dd9f2 21002575 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:COLLATE_FASTQ_UNMAP (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:44:05.125 7m 10s 7m 171.8% 1.2 GB 2.6 GB 13.3 GB 14 GB 122 16/b2069e 21002586 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:CAT_FASTQ (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:51:15.229 14.8s 2.7s 73.5% 12.9 MB 15.7 MB 4 GB 4 GB 123 fb/9df80e 21002587 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTP (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:51:30.234 1m 40s 1m 16s 835.9% 1.3 GB 2.2 GB 4.1 GB 3.7 GB 165 1e/e810d4 21002595 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:12.475 1m 8s 37.4s 1686.5% 8 GB 26.3 GB 7.7 GB 2.4 GB 146 70/837cf7 21002592 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:12.029 1m 8s 38s 1691.7% 8 GB 26.2 GB 7.7 GB 2.4 GB 145 74/1177dd 21002590 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:11.482 1m 9s 40.3s 1629.4% 8.6 GB 27 GB 7.7 GB 2.4 GB 129 18/50a05f 21002588 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:10.840 1m 9s 38.2s 1664.6% 8 GB 26.4 GB 7.7 GB 2.4 GB 130 1c/033194 21002591 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:11.553 1m 8s 37.8s 1687.9% 8 GB 26.3 GB 7.7 GB 2.4 GB 157 a3/bf55cf 21002593 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:12.085 1m 8s 37.8s 1659.7% 7.9 GB 26.5 GB 7.7 GB 2.4 GB 166 a0/763be7 21002597 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:12.707 1m 7s 37.5s 1681.0% 8.3 GB 26.5 GB 7.7 GB 2.4 GB 170 e1/88277f 21002598 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:12.758 1m 7s 40.2s 1615.9% 8.4 GB 26.9 GB 7.7 GB 2.4 GB 128 e0/5f7a9e 21002589 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:10.882 1m 14s 45.1s 1517.0% 8.4 GB 26.2 GB 7.7 GB 2.4 GB 171 9c/d3e35a 21002599 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:12.786 1m 12s 43.1s 1607.9% 8.6 GB 26.9 GB 7.7 GB 2.4 GB 169 71/489d78 21002596 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:12.672 1m 12s 45.4s 1591.0% 8.2 GB 26.4 GB 7.7 GB 2.4 GB 158 69/0858e4 21002594 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 12:53:12.442 1m 13s 45.8s 1565.2% 8.2 GB 26.4 GB 7.7 GB 2.4 GB 58 e9/ac10ce 21002548 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:GROUPREADSBYUMI (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 12:25:10.099 32m 5s 32m 1s 102.0% 3 GB 9.9 GB 21.1 GB 16.6 GB 31 91/93ab59 21000734 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:BAM2FASTQ (RMHC001_haystack_tumour-L002) COMPLETED 0 2026-02-23 11:05:24.241 1h 56m 56s 1h 56m 38s 102.5% 9.5 MB 232.3 MB 72.5 GB 72.1 GB 172 6e/fb5a89 21002607 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:CALLUMICONSENSUS (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 12:57:15.140 18m 20s 17m 51s 331.1% 6.9 GB 38.5 GB 14 GB 15.5 GB 180 43/864a73 21002839 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_MAP_MAP (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:15:35.740 54.4s 44s 140.2% 7 MB 235.7 MB 6.8 GB 5.2 KB 178 12/2e9d14 21002840 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_MAP_UNMAP (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:15:35.945 54.2s 44s 141.1% 7.1 MB 235.7 MB 6.8 GB 5.2 KB 179 23/942d00 21002837 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_UNMAP_MAP (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:15:35.248 59.9s 48s 140.5% 7 MB 235.7 MB 6.8 GB 5.2 KB 181 48/cd61be 21002846 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:COLLATE_FASTQ_MAP (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:16:30.529 14.6s 1s 14.3% 3.4 MB 8.6 MB 181 KB 29.5 KB 119 83/3b83b7 21002576 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:ALIGN_UMI:BWAMEM1_MEM (RMHC002_haystack_tumour-L001) COMPLETED 0 2026-02-23 12:44:55.472 39m 10s 38m 35s 2206.9% 7.1 GB 9.8 GB 102.4 GB 104 GB 177 f4/404e02 21002838 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_VIEW_UNMAP_UNMAP (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:15:35.556 12m 50s 12m 43s 85.4% 10.7 MB 236.4 MB 6.8 GB 4.5 GB 174 a5/f85036 21002652 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:ALIGN_UMI:BWAMEM1_MEM (RMHC001_haystack_tumour-L002) COMPLETED 0 2026-02-23 13:02:20.327 31m 20s 30m 56s 2154.0% 6.8 GB 9.6 GB 101.2 GB 101 GB 182 1d/7eeab0 21003314 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:SAMTOOLS_MERGE_UNMAP (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:28:25.337 12m 45s 12m 26s 90.0% 11.9 MB 228.3 MB 4.5 GB 4.6 GB 33 a8/4afeed 21000738 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:BAM2FASTQ (RMHC003_haystack_tumour-L001) COMPLETED 0 2026-02-23 11:14:14.285 2h 28m 46s 2h 28m 18s 102.5% 9.5 MB 232.3 MB 98.3 GB 97.6 GB 34 ab/7e7338 21000746 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:BAM2FASTQ (RMHC002_haystack_tumour-L002) COMPLETED 0 2026-02-23 11:17:29.485 2h 33m 11s 2h 32m 58s 102.5% 9.3 MB 232.3 MB 96.2 GB 95.7 GB 183 05/131cbb 21003866 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:COLLATE_FASTQ_UNMAP (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:41:10.473 11m 50s 11m 16s 163.3% 1.7 GB 3 GB 18.9 GB 20.1 GB 192 b8/245d8d 21004454 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:CONVERT_FASTQ_UMI:CAT_FASTQ (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:53:00.692 19.9s 3.6s 73.8% 12.9 MB 15.7 MB 5.8 GB 5.8 GB 193 e9/06f7ea 21004464 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTP (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:53:20.804 2m 1m 34s 893.1% 1.3 GB 2.3 GB 5.9 GB 5.3 GB 239 cc/db287d 21004527 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:22.929 1m 13s 53.4s 1719.1% 9.2 GB 26.4 GB 8.8 GB 3.4 GB 241 56/0a905b 21004530 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:23.106 1m 17s 54.5s 1733.6% 9.1 GB 26.4 GB 8.8 GB 3.4 GB 232 7f/10a09a 21004526 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:22.805 1m 18s 54.7s 1713.1% 9.5 GB 26.4 GB 8.8 GB 3.4 GB 240 6c/9af150 21004529 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:23.076 1m 17s 54.5s 1731.2% 9.4 GB 26.4 GB 8.8 GB 3.4 GB 225 2a/bf153e 21004525 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:22.701 1m 18s 55.1s 1715.5% 9.5 GB 26.4 GB 8.8 GB 3.4 GB 221 b3/961b32 21004523 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:22.140 1m 18s 57.2s 1674.9% 9.2 GB 26.5 GB 8.8 GB 3.4 GB 237 2e/8109ca 21004528 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:22.987 1m 17s 57.9s 1679.2% 9.2 GB 27.2 GB 8.8 GB 3.4 GB 213 22/c29f9b 21004522 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:21.802 1m 24s 1m 3s 1623.7% 9.1 GB 26.7 GB 8.8 GB 3.4 GB 204 ae/3737a7 21004521 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:21.669 1m 29s 1m 6s 1631.2% 9.2 GB 26.3 GB 8.8 GB 3.4 GB 194 70/fb11c5 21004519 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:21.374 1m 29s 1m 9s 1618.7% 9.1 GB 26.6 GB 8.8 GB 3.4 GB 218 cf/b103ca 21004524 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:22.332 1m 33s 1m 9s 1589.7% 9.2 GB 26.5 GB 8.8 GB 3.4 GB 197 55/d04f22 21004520 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_ALIGN:BWAMEM1_MEM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 13:55:21.523 1m 34s 1m 10s 1628.0% 9.1 GB 26.5 GB 8.8 GB 3.4 GB 184 be/a8794e 21004043 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:ALIGN_UMI:BWAMEM1_MEM (RMHC003_haystack_tumour-L001) COMPLETED 0 2026-02-23 13:43:00.736 38m 35s 38m 18s 2129.6% 6.9 GB 9.7 GB 136.6 GB 138.5 GB 39 3f/55bfb6 21000760 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:BAM2FASTQ (RMHC001_haystack_tumour-L001) COMPLETED 0 2026-02-23 11:31:24.324 3h 19m 46s 3h 19m 28s 102.6% 9.5 MB 232.3 MB 136.1 GB 135 GB 190 d0/0c8090 21004372 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:ALIGN_UMI:BWAMEM1_MEM (RMHC002_haystack_tumour-L002) COMPLETED 0 2026-02-23 13:50:40.942 1h 5m 20s 1h 4m 48s 1932.2% 7.2 GB 9.7 GB 145.6 GB 150.6 GB 44 f5/40c970 21000791 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:BAM2FASTQ (RMHC003_haystack_tumour-L002) COMPLETED 0 2026-02-23 11:41:14.521 3h 55m 51s 3h 55m 49s 102.5% 9.5 MB 232.3 MB 143.1 GB 142.4 GB 245 fc/f5b5aa 21004957 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:ALIGN_UMI:BWAMEM1_MEM (RMHC001_haystack_tumour-L001) COMPLETED 0 2026-02-23 14:51:11.026 58m 15s 57m 40s 2165.8% 6.9 GB 9.6 GB 185.6 GB 190 GB 248 f9/939ac6 21005136 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:FASTQ_CREATE_UMI_CONSENSUS_FGBIO:ALIGN_UMI:BWAMEM1_MEM (RMHC003_haystack_tumour-L002) COMPLETED 0 2026-02-23 15:37:06.304 57m 44s 57m 36s 2101.1% 6.9 GB 9.7 GB 196.1 GB 201.4 GB 250 42/066630 21005548 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_MARKDUPLICATES:GATK4_MARKDUPLICATES (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 16:59:04.952 11m 24s 11m 15s 128.2% 17.8 GB 28.8 GB 14.2 GB 3.1 GB 251 34/26a6c1 21005549 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_MARKDUPLICATES:GATK4_MARKDUPLICATES (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 16:59:05.063 11m 59s 11m 48s 129.7% 18.9 GB 28.8 GB 14.3 GB 3.1 GB 256 18/ce1f0e 21005569 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_MARKDUPLICATES:CRAM_QC_MOSDEPTH_SAMTOOLS:MOSDEPTH (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 17:10:30.568 1m 58s 1m 43s 145.8% 2 GB 2.1 GB 6.3 GB 291.8 MB 259 5f/d5a4ea 21005573 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_MARKDUPLICATES:CRAM_QC_MOSDEPTH_SAMTOOLS:MOSDEPTH (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 17:11:05.103 1m 59s 1m 50s 147.8% 2 GB 2.1 GB 6.1 GB 282.4 MB 253 77/dd8972 21005570 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_MARKDUPLICATES:CRAM_QC_MOSDEPTH_SAMTOOLS:SAMTOOLS_STATS (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 17:10:30.840 3m 48s 3m 34s 99.0% 276.3 MB 334.9 MB 6.7 GB 289.9 KB 257 7a/76f6ef 21005572 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_MARKDUPLICATES:CRAM_QC_MOSDEPTH_SAMTOOLS:SAMTOOLS_STATS (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 17:11:04.812 4m 24s 4m 15s 98.9% 276.2 MB 334 MB 6.8 GB 288.5 KB 252 90/18b211 21005550 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_MARKDUPLICATES:GATK4_MARKDUPLICATES (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 16:59:05.300 16m 39s 16m 32s 129.4% 21.6 GB 28.8 GB 17.4 GB 4.4 GB 262 cf/58bb93 21005581 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_MARKDUPLICATES:CRAM_QC_MOSDEPTH_SAMTOOLS:MOSDEPTH (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 17:15:44.911 2m 24s 2m 10s 154.7% 2 GB 2.1 GB 6.3 GB 342.9 MB 263 ca/cfe96f 21005582 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_MARKDUPLICATES:CRAM_QC_MOSDEPTH_SAMTOOLS:SAMTOOLS_STATS (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 17:15:45.193 6m 9s 5m 51s 99.0% 277.5 MB 334.4 MB 7.1 GB 291.8 KB 255 b6/a0681c 21005578 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 17:11:31.037 25m 13s 24m 59s 101.8% 2.1 GB 6.2 GB 9 GB 1.6 MB 260 0c/02735e 21005579 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 17:11:31.061 26m 43s 26m 32s 101.9% 2.4 GB 6.2 GB 9 GB 1.6 MB 264 44/d713dd 21005583 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 17:15:45.571 38m 9s 37m 56s 101.5% 2 GB 6.2 GB 9.4 GB 1.7 MB 265 2e/5309b6 21005604 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_APPLYBQSR:GATK4_APPLYBQSR (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 17:36:44.586 28m 5s 27m 37s 101.8% 2.5 GB 6.2 GB 6.6 GB 3.4 GB 268 18/ee2658 21005629 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:INDEX_CRAM (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 18:04:49.232 24.9s 1s 85.8% 11 MB 23 MB 3.4 GB 100.6 KB 269 41/9c7983 21005631 NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 18:05:14.792 1m 44s 1m 16s 143.4% 2.1 GB 2.2 GB 6.6 GB 258.1 MB 266 f6/f1b92e 21005607 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_APPLYBQSR:GATK4_APPLYBQSR (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 17:38:14.485 30m 25s 29m 54s 101.6% 2.4 GB 6.2 GB 6.7 GB 3.7 GB 273 56/bdea41 21005633 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:INDEX_CRAM (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 18:08:39.226 4.9s 1s 89.0% 3.1 MB 4.3 MB 3.7 GB 112 KB 270 e5/9a6739 21005630 NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (RMHC003_haystack_normal) COMPLETED 0 2026-02-23 18:05:14.353 3m 50s 3m 20s 99.0% 279.4 MB 336.2 MB 9.3 GB 310.3 KB 275 f3/74088b 21005634 NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 18:08:44.912 1m 54s 1m 23s 148.5% 2.1 GB 2.2 GB 7 GB 259.2 MB 276 e4/07ca2f 21005635 NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (RMHC001_haystack_normal) COMPLETED 0 2026-02-23 18:08:45.385 4m 9s 3m 40s 99.0% 1.2 GB 1.3 GB 9.6 GB 310.5 KB 267 ed/356ace 21005627 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_APPLYBQSR:GATK4_APPLYBQSR (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 17:53:54.507 42m 45s 42m 30s 101.3% 2.9 GB 6.2 GB 7 GB 5.4 GB 278 b0/db7a38 21005662 NFCORE_SAREK:SAREK:FASTQ_PREPROCESS_GATK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:INDEX_CRAM (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 18:36:39.918 4.3s 1s 90.0% 11.8 MB 23.8 MB 5.4 GB 156.7 KB 282 58/063062 21005664 NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:MOSDEPTH (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 18:36:46.092 2m 3s 1m 36s 153.0% 2 GB 2.1 GB 8.5 GB 314.8 MB 280 ab/fcc06a 21005663 NFCORE_SAREK:SAREK:CRAM_SAMPLEQC:CRAM_QC_RECAL:SAMTOOLS_STATS (RMHC002_haystack_normal) COMPLETED 0 2026-02-23 18:36:45.517 5m 29s 5m 1s 99.1% 283.1 MB 342.2 MB 11.4 GB 316.6 KB 283 b5/dea85c 21005674 NFCORE_SAREK:SAREK:MULTIQC COMPLETED 0 2026-02-23 18:42:17.075 52.1s 24.5s 28.8% 1 GB 12.7 GB 106.5 MB 74.6 MB