Nextflow workflow report

Workflow execution completed unsuccessfully!

The exit status of the task that caused the workflow execution to fail was: 1.

The full error message was:

Error executing process > 'NFCORE_HIC:HIC:COOLER:COOLER_MAKEBINS (null})'

Caused by:
  Process `NFCORE_HIC:HIC:COOLER:COOLER_MAKEBINS (null})` terminated with an error exit status (1)


Command executed:

  cooler makebins \
       \
      W303_SGD_2015_JRIU00000000.fsa.sizes \
      1000 > cooler_bins_1000.bed
  
  cat <<-END_VERSIONS > versions.yml
  "NFCORE_HIC:HIC:COOLER:COOLER_MAKEBINS":
      cooler: $(cooler --version 2>&1 | sed 's/cooler, version //')
  END_VERSIONS

Command exit status:
  1

Command output:
  (empty)

Command error:
  Traceback (most recent call last):
    File "/home/floer/work/conda/env-cd84d045ac8cca6d16b389fcdb8d93bc/bin/cooler", line 6, in 
      from cooler.cli import cli
    File "/home/floer/work/conda/env-cd84d045ac8cca6d16b389fcdb8d93bc/lib/python3.11/site-packages/cooler/__init__.py", line 14, in 
      from .api import Cooler, annotate
    File "/home/floer/work/conda/env-cd84d045ac8cca6d16b389fcdb8d93bc/lib/python3.11/site-packages/cooler/api.py", line 13, in 
      from .core import (
    File "/home/floer/work/conda/env-cd84d045ac8cca6d16b389fcdb8d93bc/lib/python3.11/site-packages/cooler/core.py", line 3, in 
      from pandas.api.types import is_categorical
  ImportError: cannot import name 'is_categorical' from 'pandas.api.types' (/home/floer/work/conda/env-cd84d045ac8cca6d16b389fcdb8d93bc/lib/python3.11/site-packages/pandas/api/types/__init__.py)

Work dir:
  /home/floer/work/14/fa0408889838905b555b8fdd09a975

Tip: view the complete command output by changing to the process work dir and entering the command `cat .command.out`